Re: [modeller_usage] Reg. Evaluation of multiple template based multi models in one script

[Modeller Caretaker <>]

On 6/12/18 9:21 AM, KEDAR SHARMA wrote:
> i have generated 50 models of my protein using advanced modeling, now i 
> want to evaluate all the models using one script which will give DOPE 
> score, GA341 and molpdf score.

DOPE and GA341 are simple to calculate:
https://salilab.org/modeller/9.20/manual/node258.html
https://salilab.org/modeller/9.20/manual/node202.html

It's trivial to write a 'for' loop in Python to loop over your 50 models 
and assess each one in turn.

molpdf doesn't need to be calculated since it's already in the PDB file 
headers. See also
https://salilab.org/modeller/9.20/manual/node167.html

	Ben Webb, Modeller Caretaker
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             https://salilab.org/modeller/
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