IHM-repval September 2018

ihm-repval@salilab.org

1 participants
4 discussions

Reminder: IHM "large" group meeting today
by Brinda Vallat 13 Sep '18

13 Sep '18

Hello Everyone, The next "large" group IHM meeting is today at 8:00 AM PDT / 10:00 AM CDT / 11:00 AM EDT / 4:00 PM BST / 5:00 PM CEST / 12:00 AM JST (Friday, September 14th). *Attendees* (based on the doodle poll <https://doodle.com/poll/im4zh8dzfudr4hfq>) 1. Ben Webb 2. Tom Goddard 3. Mikael Trellet 4. Brian Jimenez 5. Aleks Gutmanas 6. Kumaran Baskaran 7. John Westbrook 8. Brinda Vallat Please feel free to join the meeting even if you didn't sign up using the doodle poll. *Agenda: * 1. Update on current structures in PDB-Dev <https://pdb-dev.wwpdb.org/> 2. Update on the IHM-dictionary <https://github.com/ihmwg/IHM-dictionary>, MA-dictionary <https://github.com/ihmwg/MA-dictionary> and the FLR-dictionary <https://github.com/ihmwg/FLR-dictionary> 3. Update on the Python-IHM <https://github.com/ihmwg/python-ihm> library 4. Support for IHM-dictionary in HADDOCK <https://haddock.science.uu.nl/> 5. Open discussion *Connection details: * We will use *Zoom* for audio and screen sharing. There will be no video. The use of *Zoom* may require installation of new software (see "First time setup instructions for Zoom" below). To join the meeting, click on this link at the scheduled time from PC, Mac, Linux, iOS or Android: https://zoom.us/j/386263131 Meeting ID: 386 263 131 *First time setup instructions for Zoom* - Open a browser and visit https://zoom.us/test <https://www.google.com/url?q=https%3A%2F%2Fzoom.us%2Ftest&sa=D&ust=15271036…> - Click the Join button - Firefox - In Firefox, you’ll get a window to Launch Application - Close this window, and on the webpage click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting - Chrome - Click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting Please let me know if you have any questions in this regard. Thank you, Brinda -- BRINDA VALLAT, Ph.D. RCSB Institute for Quantitative Biomedicine Rutgers, The State University of New Jersey 174 Frelinghuysen Road, Piscataway NJ 08854 P: 848.445.4948 | E: brinda.vallat(a)rcsb.org

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Reminder: IHM "large" group meeting tomorrow
by Brinda Vallat 12 Sep '18

12 Sep '18

Hello Everyone, The next "large" group IHM meeting is on Thursday, September 13th at 8:00 AM PDT / 10:00 AM CDT / 11:00 AM EDT / 4:00 PM BST / 5:00 PM CEST / 12:00 AM JST (Friday, September 14th). *Attendees* (based on the doodle poll <https://doodle.com/poll/im4zh8dzfudr4hfq>) 1. Ben Webb 2. Tom Goddard 3. Mikael Trellet 4. Brian Jimenez 5. Aleks Gutmanas 6. Kumaran Baskaran 7. John Westbrook 8. Brinda Vallat Please feel free to join the meeting even if you didn't sign up using the doodle poll. *Agenda: * 1. Update on current structures in PDB-Dev <https://pdb-dev.wwpdb.org/> 2. Update on the IHM-dictionary <https://github.com/ihmwg/IHM-dictionary>, MA-dictionary <https://github.com/ihmwg/MA-dictionary> and the FLR-dictionary <https://github.com/ihmwg/FLR-dictionary> 3. Update on the Python-IHM <https://github.com/ihmwg/python-ihm> library 4. Support for IHM-dictionary in HADDOCK <https://haddock.science.uu.nl/> 5. Open discussion *Connection details: * We will use *Zoom* for audio and screen sharing. There will be no video. The use of *Zoom* may require installation of new software (see "First time setup instructions for Zoom" below). To join the meeting, click on this link at the scheduled time from PC, Mac, Linux, iOS or Android: https://zoom.us/j/386263131 Meeting ID: 386 263 131 *First time setup instructions for Zoom* - Open a browser and visit https://zoom.us/test <https://www.google.com/url?q=https%3A%2F%2Fzoom.us%2Ftest&sa=D&ust=15271036…> - Click the Join button - Firefox - In Firefox, you’ll get a window to Launch Application - Close this window, and on the webpage click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting - Chrome - Click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting Please let me know if you have any questions in this regard. Thank you, Brinda -- BRINDA VALLAT, Ph.D. RCSB Institute for Quantitative Biomedicine Rutgers, The State University of New Jersey 174 Frelinghuysen Road, Piscataway NJ 08854 P: 848.445.4948 | E: brinda.vallat(a)rcsb.org

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IHM "large" group meeting: schedule, agenda and connection details
by Brinda Vallat 10 Sep '18

10 Sep '18

Hello Everyone, The next "large" group IHM meeting is on Thursday, September 13th at 8:00 AM PDT / 10:00 AM CDT / 11:00 AM EDT / 4:00 PM BST / 5:00 PM CEST / 12:00 AM JST (Friday, September 14th). *Attendees* (based on the doodle poll <https://doodle.com/poll/im4zh8dzfudr4hfq>) 1. Ben Webb 2. Tom Goddard 3. Mikael Trellet 4. Brian Jimenez 5. Aleks Gutmanas 6. Kumaran Baskaran 7. John Westbrook 8. Brinda Vallat Please feel free to join the meeting even if you didn't sign up using the doodle poll. *Agenda: * 1. Update on current structures in PDB-Dev <https://pdb-dev.wwpdb.org/> 2. Update on the IHM-dictionary <https://github.com/ihmwg/IHM-dictionary>, MA-dictionary <https://github.com/ihmwg/MA-dictionary> and the FLR-dictionary <https://github.com/ihmwg/FLR-dictionary> 3. Update on the Python-IHM <https://github.com/ihmwg/python-ihm> library 4. Support for IHM-dictionary in Haddock <https://haddock.science.uu.nl> 5. Open discussion *Connection details: * We will use *Zoom* for audio and screen sharing. There will be no video. The use of *Zoom* may require installation of new software (see "First time setup instructions for Zoom" below). To join the meeting, click on this link at the scheduled time from PC, Mac, Linux, iOS or Android: https://zoom.us/j/386263131 Meeting ID: 386 263 131 *First time setup instructions for Zoom* - Open a browser and visit https://zoom.us/test <https://www.google.com/url?q=https%3A%2F%2Fzoom.us%2Ftest&sa=D&ust=15271036…> - Click the Join button - Firefox - In Firefox, you’ll get a window to Launch Application - Close this window, and on the webpage click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting - Chrome - Click the link to download & run Zoom - Download and run the installer to install Zoom - The Zoom application will launch and join the test meeting Please let me know if you have any questions in this regard. Thank you, Brinda -- BRINDA VALLAT, Ph.D. RCSB Institute for Quantitative Biomedicine Rutgers, The State University of New Jersey 174 Frelinghuysen Road, Piscataway NJ 08854 P: 848.445.4948 | E: brinda.vallat(a)rcsb.org

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The next "large group" integrative/hybrid modeling videoconference
by Ben Webb 05 Sep '18

05 Sep '18

Hi all - we will be having a videoconference for the integrative/hybrid modeling project next month, on Thursday September 13th: https://github.com/ihmwg/IHM-dictionary/wiki/Meetings We will update everyone on our progress on the IHM and related dictionaries, with a look at the current set of depositions in the PDB-Dev database, and also have some open discussion time - anyone from the group can raise any issues they may be having with the design of the dictionary, deposition of models, and so on. Please fill out the Doodle poll to let us know your availability, so we can schedule the call at a time that most people can make: https://doodle.com/poll/im4zh8dzfudr4hfq Ben -- ben(a)salilab.org https://salilab.org/~ben/ "It is a capital mistake to theorize before one has data." - Sir Arthur Conan Doyle

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IHM-repval September 2018