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The model class: handling of atomic coordinates, and model building

The model class holds all information about a 3D model (such as its Cartesian coordinates, topology, and optimization information). It also provides methods for reading, writing and transforming the model. Models are also sequences, so all methods and attributes of Sequence objects (see Section 6.16) are also available for models (e.g., Sequence.residues, Sequence.chains).


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