You make similar file like ali using your sequence and a homologus
structure(s) and follow the steps as explained in the modeller manual.
There is a modeller users form. You please mail your quary to them. I am
copieing this e-mail to them.
| Boojala V. B. Reddy Ph. D. |
| Assistant Research Scientist |
| University of California, San Diego Fax: (858)-822-0873 |
| San Diego Supercomputer Center(SDSC) Voice: (858)-822-0860 |
| Chemistry Research Bulding (CRB-166) |
| 9500 Gilman Drive, e-mail: |
| La Jolla, CA 92093-0537 http://www.sdsc.edu/~breddy |
---------- Forwarded message ----------
Date: Mon, 18 Feb 2002 14:23:15 +0530 (GMT+5:30)
From: Gowthaman R <>
To: Boojala Reddy <>
Subject: Re: starting problem
this is gowtham a graduate student doing phd at ICGEB New delhi.
im planning to do some 3d predictions using the modeller
i installed adn the tutorial is running fine.
now i would like to use some malarial protiens but i donot kow how to get
the input files like .ali files ...... im unable to start my work.
can u help me out in this regard.........and it is bit urgent.
i would be thankful to u verymuch
waiting for ur reply