[modeller_usage] (no subject)

[Praveen Madala <>]

Hi,

I have been trying to 	MODEL a protein with distance restraints 
using MODELER version-12 with InsightII . Here I am attaching my .rsr 
file, and the below are the problems i got in my trials....

MODELLER12 VERSION: USER FORMAT
R    3   1   1  21   2   2   0   7.1000    0.3387	SG:140	SG:222
R    3   1   1  21   2   2   0   16.0000   0.3387	CA:139	CA:248
R    3   1   1  22   2   2   0   17.0000   0.3387	CA:139	CA:248
R    3   1   1  21   2   2   0   17.0000   0.3387	CB:139	CB:248
R    3   1   1  22   2   2   0   18.0000   0.3387	CB:139	CB:248
R    3   1   1  21   2   2   0   16.0000   0.3387	CA:139	CA:251
R    3   1   1  22   2   2   0   17.0000   0.3387	CA:139	CA:251
R    3   1   1  21   2   2   0   16.5000   0.3387	CB:139	CB:251
R    3   1   1  22   2   2   0   17.5000   0.3387	CB:139	CB:251
R    3   1   1  21   2   2   0   19.6000   0.3387	CA:139	CA:252
R    3   1   1  22   2   2   0   20.6000   0.3387	CA:139	CA:252
R    3   1   1  21   2   2   0   21.5000   0.3387	CB:139	CB:252
R    3   1   1  22   2   2   0   22.5000   0.3387	CB:139	CB:252
R    3   1   1  21   2   2   0   13.3000   0.3387	CA:139	CA:249
R    3   1   1  22   2   2   0   15.3000   0.3387	CA:139	CA:249
R    3   1   1  21   2   2   0   11.4000   0.3387	CB:139	CB:249
R    3   1   1  22   2   2   0   13.4000   0.3387	CB:139	CB:249
R    3   1   1  21   2   2   0   15.0000   0.3387	CA:139	CA:250
R    3   1   1  22   2   2   0   17.0000   0.3387	CA:139	CA:250
R    3   1   1  21   2   2   0   15.3000   0.3387	CB:139	CB:250
R    3   1   1  22   2   2   0   17.3000   0.3387	CB:139	CB:250
R    3   1   1  21   2   2   0   10.0000   0.3387	CA:117	CA:292
R    3   1   1  21   2   2   0   6.00000   0.3387	N:117	N:292
R    3   1   1  27   2   2   0   8.00000   0.3387	CB:117	CG:208
R    3   1   1  27   2   2   0   10.0000   0.3387	CB:117	CG:208
R    3   1   1  27   2   2   0   8.00000   0.3387	CB:117	CG:211
R    3   1   1  27   2   2   0   10.0000   0.3387	CB:117	CG:211

1) Modeler is not recognising the "SG" (first line) or "CG" (last 
four lines) atoms, when i am trying to run the MODELER program.

2) If I remove these lines the program is getting CORE dumped.

and also I didnt under stand when to use 21, 22, 27 and 30 in 
distance restraints.

can you please advice me what might be the reason, and what should i do....

regards,
Praveen