modeller_usage

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modeller_usage@salilab.org

June 2022

3 participants
2 discussions

Error in multichain modeller
by Zara Saeed 23 Jun '22

23 Jun '22

I am using the following python file for multichain modelling. I am sending you my script, structure file and alignment file in the attachment. When I run this script it gives the following error. *raise KeyError("No such chain: %s" % indx)* *KeyError: 'No such chain: F'* I read about it in the modeller 's problem and came to know that it can be due to unavailability of chain breaker. But as you can see in my ali. file chain breaker is present in sequence. Can you identify the problem please? Best regards, zeenat

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(no subject)
by LEE Seayoung 15 Jun '22

15 Jun '22

Dear Whom it may concern, I am writing this email to request you a suggestion about settings in Modeller. Currently, I have trouble in running Modeller program. It seems like the program doesn't have the right Pythonpath. In the error message, it says that referring to modv10, the pythonpath is system/library/framework........ and it turns out that corresponding file doesn't exist. I am using iMac (version12.4) and I need to use Modeller10.2. Would you please suggest me to resolve this problem? Thank you Sincerely Seayoung LEE

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