---------- Forwarded message ---------
De: Victor Eduardo Rojas Pérez <victor.rojas.03(a)alu.ucm.cl>
Date: mar, 3 sept 2024 a las 13:11
Subject: Error in modeller 10.5
To: Modeller Caretaker <modeller-care(a)salilab.org>, <
modeller_usage(a)salilab.org>
Dear All,
Along with greeting them cordially.
I have the following error using modeller 10.5. in linux operating system.
I have added the restyp RTN, retinal with % symbol in the restyp.lib file
in the modlib folder but I still have this error.
What else could I do to solve this error.
Thank you.
mod10.5 align1.py
Could not find platform independent libraries <prefix>
Could not find platform dependent libraries <exec_prefix>
Consider setting $PYTHONHOME to <prefix>[:<exec_prefix>]
'import site' failed; use -v for traceback
Traceback (most recent call last):
File "align1.py", line 56, in ?
a.make() # do homology modeling
File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line
141, in make
self.homcsr(exit_stage)
File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line
611, in homcsr
aln = self.read_alignment()
File "/usr/lib/modeller10.5/modlib/modeller/automodel/automodel.py", line
572, in read_alignment
aln.append(file=self.alnfile, align_codes=codes)
File "/usr/lib/modeller10.5/modlib/modeller/alignment.py", line 82, in
append
allow_alternates)
_modeller.ModellerError: read_al_375E> Unknown residue
type,position,sequence: % 334 1
--
* Víctor E. Rojas Pérez, Msc.*
*Estudiante Doctorado en Biotecnología Traslacional *
* Universidad Católica del Maule *
*Facultad de Ciencias Agrarias y Forestales*
*e-mail: victor.rojas.03(a)alu.ucm.cl <victor.rojas.03(a)alu.ucm.cl>*
--
* Víctor E. Rojas Pérez, Msc.*
*Estudiante Doctorado en Biotecnología Traslacional *
* Universidad Católica del Maule *
*Facultad de Ciencias Agrarias y Forestales*
*e-mail: victor.rojas.03(a)alu.ucm.cl <victor.rojas.03(a)alu.ucm.cl>*
