Re: [modeller_usage] loop missing in a crystal structure

On 4/8/14, 9:27 AM, flavio seixas wrote: > I have already considered that option. > However, generating models aligned with structure A does not make a > model identic to structure A. In another words, I do not want to lose > the experimental information that structure A brings

In that case, simply select only the loops for refinement: http://salilab.org/modeller/9.13/manual/node23.html

Ben Webb, Modeller Caretaker