hello, i am trying to run modeller8v0 version on windows 2000. But i am getting these errors which i am unable to make out.
D:\Data\Aneesh>mod8v0 model_JC1V2.py 'import site' failed; use -v for traceback Traceback (most recent call last): File "model_JC1V2.py", line 18, in ? a.make() # do the actual homology modelling File "C:\Program Files\Modeller8v0/modlib\modeller\automodel\automodel.py", li ne 88, in make self.homcsr(exit_stage) File "C:\Program Files\Modeller8v0/modlib\modeller\automodel\automodel.py", li ne 299, in homcsr aln = self.read_alignment() File "C:\Program Files\Modeller8v0/modlib\modeller\automodel\automodel.py", li ne 293, in read_alignment aln.append(file=self.alnfile, align_codes=self.knowns+[self.sequence]) File "C:\Program Files\Modeller8v0/modlib\modeller\alignment.py", line 36, in append return self.__int_append('alignment.append', io, vars) File "C:\Program Files\Modeller8v0/modlib\modeller\alignment.py", line 65, in __int_append return self.top.read_alignment(logname, aln=self.modpt, io=io.modpt, File "C:\Program Files\Modeller8v0/modlib\modeller\util\top.py", line 42, in r ead_alignment self.error_check() File "C:\Program Files\Modeller8v0/modlib\modeller\util\top.py", line 16, in e rror_check raise ModellerError modeller.error.ModellerError
I will be very greatful if somebody can give me some hints. regads aneesh
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aneesh goyal wrote: > i am trying to run modeller8v0 version on windows > 2000. But i am getting these errors which i am unable > to make out.
Don't use Modeller 8v0. Use 8v2 instead; 8v2 gives much more readable error messages.
> raise ModellerError > modeller.error.ModellerError
All this tells you is that an error occurred. You should look in the .log file to see what the error was exactly. But you should definitely use 8v2 to get a 'better' error message.
Ben Webb, Modeller Caretaker