I had installed modeller software in my computer. I was practising the basic commands. I am comfortable till executing the command.
Execution was successful and I got the information for Target_profile.log and Target_profile.prf as described in the tutorial.
But to the next step when i run the command
i get these errors!!!!!!!!!!!!
============================================================================= Traceback (most recent call last): File "Target_compare.py", line 7, in ? aln.malign3d() File "/usr/lib/modeller8v2/modlib/modeller/alignment.py", line 210, in malign3d io=io.modpt, libs=libs.modpt, **vars) File "/usr/lib/modeller8v2/modlib/modeller/util/top.py", line 93, in malign3d return _modeller.malign3d(aln, io, libs, *args) _modeller.error: malign3_682E> Structural information is not available for all sequences in the alignment. Aborting. ============================================================================
I have downloaded the necessary PDB files manually, Could you tell which/where directory to paste these files with a detailed command list since i am beginner to modeller.
With Regards Robert Selwyne.