18 May
2011
18 May
'11
8:18 a.m.
On 5/18/11 7:18 AM, Benjamin SCHWARZ wrote: > Can someone tell me what is the (best) way to extract fitted models > after an iterative_structural_align() ?
Use Structure.write(): http://salilab.org/modeller/9.9/manual/node315.html
aln = alignment( env ) for model in models: aln.append_model( model ) salign.iterative_structural_align( aln )
for s in aln: s.write('%s-fitted.pdb' % s.code)
Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage