27 Jul
2009
27 Jul
'09
9:32 a.m.
Hi,
I am using modeller to build some homology model. But I am unable to find any script that can be used to minimize the structure. Is there any script available in modeller that can be used to energy minimize the modeled structure. I try to use the old script, model_energies.py but it give me following error message
Traceback (most recent call last): File "model_energies.py", line 41, in ? mdl.generate_topology(aln, sequence=code+'-ini') TypeError: generate_topology() got an unexpected keyword argument 'sequence'
How modeller can be used to energy minimize a model structure. I am using current version of modeller.
Thank you very much.
Sincerely, S