On 11/10/2013 10:54 PM, Yi Kong wrote: > _modeller.ModellerError: read_al_373E> Protein specified in > ALIGN_CODES(i) was n > ot found in the alignment file; ALIGN_CODES( 1) = 4h10
In your Python script you have asked Modeller to read the '4h10' sequence from your alignment file, but the alignment doesn't contain a sequence by that name. Either change your alignment file or the Python script so that the names match.
Ben Webb, Modeller Caretaker