You should check the Align2D command
Eric
------------------------------------ Eric Feyfant, Ph.D. Computational Chemistry Wyeth Research 200 Cambridge Park Drive Cambridge, MA 02140 tel: +1 617 665 5656 fax: +1 617 665 5682 email: efeyfant@wyeth.com
>>> Modeller Care modeller-care@salilab.org 06/02/03 12:18PM >>>
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Dear Sir,
I have a few questions before starting modelling. I would like to know how one can use modeller for aligning the sequences that have the structure (treated as templates for modelling) and that do not have a solved structure (our target). I couldn't get the answer for this question from the modeller tutorial.
Expecting the answer as soon as possible.
Thanking You
Nethaji