Does anyone know whats going on here? I am trying to exit stage 2 but when I add that constriant to the model-single.py file all I get is the following log file and no models being built. As soon as I remove the exit command I get model the models.
Here is the log file:
check_ali___> Checking the sequence-structure alignment.
Implied target CA(i)-CA(i+1) distances longer than 8.0 angstroms:
ALN_POS TMPL RID1 RID2 NAM1 NAM2 DIST ---------------------------------------------- END OF TABLE read_to_681_> topology.submodel read from topology file: 3
getf_______W> RTF restraint not found in the atoms list: residue type, indices: 18 23 atom names : C +N atom indices : 175 0
getf_______W> RTF restraint not found in the atoms list: residue type, indices: 18 23 atom names : C CA +N O atom indices : 175 171 0 176
Dynamically allocated memory at finish [B,kB,MB]: 2152131 2101.690 2.052 Starting time : 2006/04/23 16:51:44.937 Closing time : 2006/04/23 16:51:47.203 Total CPU time [seconds] : 2.20