On 9/6/13 6:19 AM, fantasticqhl wrote: > I want to add some additional restraints during homology modelling, but > it seems to be not working.
You set up a new "MyModel" class, but then you don't use it! Use MyModel rather than automodel here:
> a = automodel(env, alnfile='2LMO-aln.ali',
Ben Webb, Modeller Caretaker