21 Sep
2012
21 Sep
'12
5:30 a.m.
On 9/21/12 6:26 AM, Nanda Pandey wrote: > Do i need to convert my sequence to PIR file format in order to use it.
If by "use it", you mean you want to build a comparative model, then yes.
> If yes, how do i do it??
PIR files are just plain text, so they're very easy to make manually in a text editor or with some simple scripting.
> Is it recommended to generate alignment from external sources and then > perform modelling using modeller or I can generate my model for a > sequence using only modeller.
You can do it either way. The alignment you use for modeling doesn't have to be generated by Modeller.
Ben Webb, Modeller Caretaker
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