On 7/1/13 5:00 AM, Ramin Ekhteiari wrote: > please let me know the main deference between these two python scripts. > I suppose the deference is *this*: > the first one do the comparative modeling with the base of template for > all residues, > but the second one, do the same except for residues 197 - 198.
Yes, that's right.
> But I see a main deference between the results (output structures) > are the applied methods of these two script are the same or not?
Of course the output structures will be different, because you're optimizing a different set of residues. But the method used is the same in both cases.
Ben Webb, Modeller Caretaker