29 Nov
2010
29 Nov
'10
10:50 a.m.
On 11/28/2010 07:40 PM, bharat lal wrote: > I want to insert a peptide fragment into one of the loops of my template > protein structure .. Can anybody tell me how can I do it ..
This should be straightforward enough. Align your target sequence with two templates - the peptide fragment (one template) in the loop region, and your existing "template protein structure" over the rest of the sequence (not the loop region).
Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage