1 Jul
2015
1 Jul
'15
9:52 a.m.
On 6/15/15 3:18 AM, Pawel Kedzierski wrote: > How to reliably calculate the minimum RMSD (and superposition) between > CA carbons, based on sequence alignment?
If you don't want to change the existing alignment, there is only one way to it in Modeller - use selection.superpose(). The alignment routines (salign, malign3d) will modify the alignment.
Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage