Dear Modeller Users,
I trying simple modelling methodology to model required protein structure. Till build_profile.py everything went well.
But when gave compare.py.....i am get an error as follows
*Traceback (most recent call last):* * File "compare.py", line 11, in ?* * m = model(env, file=pdb, model_segment=('FIRST:'+chain, 'LAST:'+chain)) * * File "C:\Program Files\Modeller9v7\modlib\modeller\model.py", line 72, in __in* *it__* * self.read(**vars)* * File "C:\Program Files\Modeller9v7\modlib\modeller\model.py", line 117, in rea* *d* * model_format, model_segment)* *IOError: pdbnam_____E> Filename for PDB code not found: 3d3l* * Directories: .;atom_files* * Extensions : ;.atm;.pdb;.ent;.crd* * (Also tried prepending 'pdb', looking for .Z, .gz, .bz2, .7z, * * and trying PDB-style subdirectories - e.g. ab for pdb1abc.ent)*
Do I need make any modifications in my compare.py file....I am attaching compare.py file which i used. Please help me with this problem.
Thanking You, Anogna