[modeller_usage] ternary complex in modweb

James Fethiere

2 Jul 2007 2 Jul '07

5:37 p.m.

Hi,

I'm trying to generate a model of an interleukine receptor complex using modweb. I have modelled separately 2 of the partners using modweb, and superimposed the models on the the template in pymol. However, modweb cannot find a reliable template of the last partner (which corresponds to a 4 hlx IL). I guess I can use the full ternary complex as a template, but don't see how this can be done within modweb. Any idea?

Thanks

James

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