14 Apr
2014
14 Apr
'14
4:43 a.m.
Dear modeler users,
I'm looking for the posible modeling script which could do:
i - multiple sequence alignment of several sequences agains target sequence (for which experimental structure is exist) to detect common functional-relevant motifs in each sequence of ensemble
ii- select the aligned sequence from the ensemble
iii- make a homology model for this structure based on the provided experimental (reference) structure including S-S bridges and ligand's coppied from the reference.
Please provide me with simolple python example of such fussion of sequence analysis and homology modeling,
Best,
James S.