[modeller_usage] Force B-hairpin loop when modelling

Rienk Doetjes

25 Oct 2012 25 Oct '12

6:33 a.m.

Hi all!

I am working with a structure that, according to all available information I have, contains a beta hairpin loop. Whenever I use modeller to produce a homology model, this beta-hairpin will not be formed. Is there a way I can force modeller to actually generate this feature I want? Forcing the standard secondary structure does not seem to work.

Thanks,

Rienk

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