(- suse linux 8.1 - modeller6v2 - file pdb is pdb1f4a.ent )

with file modelo1.top the process to run correctly

INCLUDE

SET OUTPUT_CONTROL = 1 1 1 1 1 SET ALNFILE = 'archivo.ali' SET KNOWNS = '1f4aC' SET SEQUENCE = 'sec1' SET STARTING_MODEL= 1 SET ENDING_MODEL = 1

CALL ROUTINE = 'model'

----------------------------------------------------------------------------------------------------- BUT

with file modelo2.top the process not run

INCLUDE

SET OUTPUT_CONTROL = 1 1 1 1 1 SET ALNFILE = 'archivo.ali' SET KNOWNS = '1f4aC' SET SEQUENCE = 'sec1' SET STARTING_MODEL= 1 SET ENDING_MODEL = 1

CALL ROUTINE = 'model'

and log file is:

MODELLER 6v2, 17 Feb 2002

PROTEIN STRUCTURE MODELLING BY SATISFACTION OF SPATIAL RESTRAINTS

Copyright(c) 1989-2002 Andrej Sali All Rights Reserved

Written by A. Sali with help from A. Fiser, R. Sanchez, M.A. Marti-Renom, B. Jerkovic, A. Badretdinov, F. Melo, J.P. Overington & E. Feyfant Rockefeller University, New York, USA Harvard University, Cambridge, USA Imperial Cancer Research Fund, London, UK Birkbeck College, University of London, London, UK

Kind, OS, HostName, Kernel, Processor: 4, Linux bioinf4 2.4.19-4GB i686 Date and time of compilation : 07/16/2002 11:42:16 Job starting time (YY/MM/DD HH:MM:SS): 2003/04/23 11:53:47.784

TOP_________> 105 705 SET ALNFILE = 'archivo.ali'

TOP_________> 106 706 SET KNOWNS = '1f4aC'

TOP_________> 107 707 SET SEQUENCE = 'sec1'

TOP_________> 108 708 SET STARTING_MODEL = 1

TOP_________> 109 709 SET ENDING_MODEL = 1

Dynamically allocated memory at finish [B,kB,MB]: 2200483 2148.909 2.099 Starting time : 2003/04/23 11:53:47.784 Closing time : 2003/04/23 11:53:50.734 Total CPU time [seconds] : 2.88

---------------------------------------------------------------------------------------- which is a problem?

which is a difference between the files modelo1.top and modelo2.top?

is a bug the modeller?

the files top to contain the same information but with file model2.top the process not run.

thanks..