Just to be sure about what to do in this case: If I want to run 2 serial jobs (250 models in each job). To generate the random seed, I need to apply the informations of the script randomize.py into each script of model_single.py, is that right?
------------------------------------- Flavio Augusto Vicente Seixas Laboratory of Structural Biochemistry Department of Biochemistry Universidade Estadual de Maringá, PR, Brazil http://www.uem.br On Monday, March 24, 2014 8:01 PM, Modeller Caretaker firstname.lastname@example.org wrote:
On 03/24/2014 02:18 PM, Yao, Jianzhuang wrote: > I am running Modeller to build 500 homology models for a > methyltransferase. Now I am running serial job. Do you think I can run > parallel job? Or do you think I can submit the same script for 500 times > and I can get the same results with serial job?
Sure, you can do it either way. If you run as a serial job though, make sure you specify a different random seed for each run, otherwise you'll get the same model each time.
Ben Webb, Modeller Caretaker