Hello Ben thank you for your kind update:).
I tired the ModLoop, however, have 91 residues accordingly was rejected due to length. If there is way to work around this error let me know please, thanks:)
My Enter Loop Segment promoting this error.
88:A:100:A: 88:B:100:B: 88:C:100:C: 88:D:100:D: 88:E:100:E: 88:F:100:F: 88:G:100:G:
(I will continue with the other Advanced Tutorial.)
On Thu, Sep 22, 2022 at 8:54 PM Modeller Caretaker < email@example.com> wrote:
> On 9/22/22 9:57 AM, Joel Subach wrote: > > In my case which tutorial should I follow for this loop refinement: > > The advanced tutorial at > https://salilab.org/modeller/tutorial/advanced.html is the best place to > start. The Cryo-EM tutorial scores the resulting loop models based on > their fits into a cryo-EM map, so wouldn't make sense for you unless you > also have such a map. > > Alternatively, you can use the ModLoop web server at > https://modbase.compbio.ucsf.edu/modloop/ > > Ben Webb, Modeller Caretaker > -- > firstname.lastname@example.org https://salilab.org/modeller/ > Modeller mail list: https://salilab.org/mailman/listinfo/modeller_usage >