IMP-users February 2011

imp-users@salilab.org

5 participants
4 discussions

Question about conditional restraints
by Davide Bau 04 Apr '11

04 Apr '11

Hi everyone, I need to implement a conditional restraint to account for multiple copies of the same particles in my data set, ie to account for interaction ambiguity. Are conditional restraints implemented in IMP? Thanks! Davide -- Davide Baù Structural Genomics Unit Bioinformatics & Genomics Department, Prince Felipe Research Center Avda. Autopista del Saler 16, 46012 Valencia, Spain Tel: +34 96 328 96 80 (ext. 1004) Fax: +34 96 328 97 01 email: dbau(a)cipf.es web: http://bioinfo.cipf.es/dbau/

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algebra::Vector3Ds -> atom::Hierarchy
by Keren Lasker 13 Feb '11

13 Feb '11

is there a wrapper function that gets algebra::Vector3Ds and returns a atom::Hierarchy ? if not i will write one .... :)

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is there an easy way in imp to get the residue type using a 1 letter code?
by Keren Lasker 04 Feb '11

04 Feb '11

thanks.

2 1

how to transcode voxel index vidx to voxel dim index i, j, k ?
by Benjamin SCHWARZ 04 Feb '11

04 Feb '11

Hi list, I couldn't find the function that computes the "index coordinates" of a voxel from its voxel index (somehow, the opposite of xyz_ind2voxel() function.) do you know if there is any ? --Ben

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IMP-users February 2011