IMP-users November 2014

imp-users@salilab.org

2 participants
2 discussions

missing binaries?
by Joel Mackay 16 Dec '14

16 Dec '14

Hi all I have just installed IMP 2.3 and am puzzled by the absence of binaries such as idock and emagefit. I couldn't see any indication in the changelog that they had been discontinued. I also get errors if I type "multifit help" or "cnmultifit help" (recommended commands in the tutorial). The error that comes up is: Traceback (most recent call last): File "/usr/bin/multifit", line 3, in <module> import IMP ImportError: No module named IMP I am wondering if I have done something wrong in the installation. Thanks Joel ------------------------------------------------------------------------------------------------------------------------------ Professor Joel Mackay | NHMRC Senior Research Fellow School of Molecular Bioscience THE UNIVERSITY OF SYDNEY Rm 674, Building G08 | The University of Sydney | NSW | 2006 | Australia T +61 2 9351 3906 | F +61 2 9351 5858 E joel.mackay(a)sydney.edu.au | W www.mmb.usyd.edu.au/mackay/

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Re: [IMP-users] missing binaries?
by Joel Mackay 25 Nov '14

25 Nov '14

Hi Ben We are running redhat5 and have also tried redhat6 and fedora 20. It seems that the things that are missing change with each OS. Fedora20 was best. Redhat5 was missing idock and emagefit (among other things) and redhat6 was still missing idock. Is it because they RPM senses whether the OS will be able to handle each binary and decides whether or not to install it on that basis? We tried installing the RPM but also building from source. I think the other problem, relating to the missing IMP module, is due to conflicts with python versions - that is, we have several pythons on the system and the IMP modules were being built into a python that was not the default one that you get from the command line... Cheers Joel ------------------------------------------------------------------------------------------------------------------------------ Professor Joel Mackay | NHMRC Senior Research Fellow School of Molecular Bioscience THE UNIVERSITY OF SYDNEY Rm 674, Building G08 | The University of Sydney | NSW | 2006 | Australia T +61 2 9351 3906 | F +61 2 9351 5858 E joel.mackay(a)sydney.edu.au | W www.mmb.usyd.edu.au/mackay/

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IMP-users November 2014