IMP-users September 2019

imp-users@salilab.org

2 participants
2 discussions

BuildModel 2 BuildSystem
by Marcell Miski 26 Sep '19

26 Sep '19

Dear Imp-Users, I am trying to model a complex using IMP however, I can't use the older IMP on a server. My problem is that when I try to change to using BuildSystem, my simulation fails. I attach, the original modeling.py and the new modeling.py with the two inputs. Can you help me how to fix this? Best regards, Marcell Miski Ph.D. Student PPCU FIT BP HU

2 4

changing the python version in IMP
by Merav Braitbard 05 Sep '19

05 Sep '19

Hi, my default version of python is 2.7, but when I tried to run imp with this version I've got an error that numpy version is old. So I tried to use python 3.7 like this: setup_environment.sh python3.7 modeling.py and I got this error: *Traceback (most recent call last): File "modeling.py", line 21, in <module> import IMP.pmi.restraints.crosslinking File "/vol/sci/bio/bio3d/meravb/Programs/imp_build_cluster/lib/IMP/__init__.py", line 11, in <module> import _IMP_kernelImportError: /vol/sci/bio/bio3d/meravb/Programs/imp_build_cluster/lib/_IMP_kernel.so: wrong ELF class: ELFCLASS64* what can I do in order to run IMP properly. Furthermore recently it takes very long time (hours) to build the IMP. Do you know why this has happened? Thanks, Merav

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IMP-users September 2019