Hi all I have just installed IMP 2.3 and am puzzled by the absence of binaries such as idock and emagefit. I couldn't see any indication in the changelog that they had been discontinued.
I also get errors if I type "multifit help" or "cnmultifit help" (recommended commands in the tutorial). The error that comes up is:
Traceback (most recent call last): File "/usr/bin/multifit", line 3, in <module> import IMP ImportError: No module named IMP
I am wondering if I have done something wrong in the installation.
Thanks Joel
------------------------------------------------------------------------------------------------------------------------------ Professor Joel Mackay | NHMRC Senior Research Fellow School of Molecular Bioscience
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On 11/25/14 2:32 PM, Joel Mackay wrote: > I have just installed IMP 2.3 and am puzzled by the absence of binaries > such as idock and emagefit. I couldn’t see any indication in the > changelog that they had been discontinued.
They haven't...
> I also get errors if I type "multifit help" or "cnmultifit help" > (recommended commands in the tutorial). The error that comes up is: > > Traceback (most recent call last): > > File "/usr/bin/multifit", line 3, in <module> > import IMP > ImportError: No module named IMP
Well, something's definitely wrong there. Which OS are you using and which binary installer?
Ben
On 11/25/2014 02:32 PM, Joel Mackay wrote: > Hi all I have just installed IMP 2.3 and am puzzled by the absence of > binaries such as idock and emagefit.
FWIW, since the OpenCV libraries that these modules need aren't available on RHEL (and it doesn't look like they're going to appear in EPEL either any time soon) we bundle them with IMP now (but you'll need to use a nightly build to get that).
> I also get errors if I type "multifit help" or "cnmultifit help" > (recommended commands in the tutorial). The error that comes up is: > > Traceback (most recent call last): > File "/usr/bin/multifit", line 3, in <module> > import IMP > ImportError: No module named IMP
This happens because /usr/bin/multifit in the RHEL5 package for IMP 2.3.0 tries to run /usr/bin/python (which is Python 2.4) whereas IMP itself was built against Python 2.6. In the IMP 2.3.1 release (or nightly build) it uses the correct /usr/bin/python26.
Ben
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Joel Mackay