Dear imp users and developers,
I need some help with compiling the source code on Ubuntu 10.04 I tried compiling imp with: >scons prefix=/installation/folder build=debug install
and the only imp binaries being generated are foxs and protein_ligand_score.
the only error I get is: """ sh: Syntax error: Bad fd number """ and the graphviz, gslcblas and modeller dependencies are missing otherwise the installation finishes without errors.
Since Ubuntu has system libraries in a different place than Fedora I tried compiling imp by specifying libpath and linking it to python. What is odd is that graphviz and gslcblas are not found when I specify libpath /usr/lib/graphviz/ /usr/lib/libgslcblas.so.0 >scons -j 16 libpath=/usr/lib:/usr/lib64 path=/usr/bin pythonpath=/usr/lib64/python2.6 prefix=/home/turk/imp build=debug install
again I assume the installation directory is missing some content ../bin: protein_ligand_score foxs ../lib64/python2.6/site-packages: IMP _IMP_algebra.so _IMP_atom.so _IMP_benchmark.so _IMP_container.so _IMP_core.so _IMP_display.so _IMP_domino.so _IMP_em.so _IMP_example.so _IMP_gsl.so _IMP_helper.so _IMP_misc.so _IMP_restrainer.so _IMP_saxs.so _IMP.so _IMP_statistics.so
after adding site-packages to the $PYTHONPATH python import imp gives me: i>>> import IMP Traceback (most recent call last): File "<stdin>", line 1, in <module> File "/home/turk/imp/lib64/python2.6/site-packages/IMP/__init__.py", line 25, in <module> _IMP = swig_import_helper() File "/home/turk/imp/lib64/python2.6/site-packages/IMP/__init__.py", line 17, in swig_import_helper import _IMP ImportError: libimp.so: cannot open shared object file: No such file or directory
Now I don't know what to try next and if playing with swig will bring me any further -> the email :-) All suggestions are welcome :)
Martin