> On Apr 14, 2016, at 2:55 PM, Ben Webb ben@salilab.org wrote: > > On 4/14/16 2:34 PM, Isabelle Phan wrote: >> thanks for the update. There were a few Doxygen warnings during >> installation (Mac OSX 10.11.4), e.g.: >> >> protocol.dox:130: warning: unable to resolve reference to >> `emagefit_3sfd' for \ref command > > That's to be expected. When you build an IMP module (EMageFit in this case) it also builds the documentation for just that module. At that point doxygen isn't able to resolve links to other modules or parts of the documentation (in this case, the EMageFit documentation is linking to an example elsewhere in the manual). The link does get resolved though when you build the complete documentation.
OK, makes sense. I ran 'ninja IMP-doc-install’ and local docs look good. Thanks,
Isabelle